Nephrology
Clinical factors associated with hospital mortality in critically ill adult COVID-19 patients with AKI requiring CRRT: A multicenter study.
Link: https://doi.org/10.5414/CN111404 Authors: Cama-Olivares, Augusto; Tamhane, Ashutosh; Ortiz-Soriano, Victor; Farrell, Douglas; Wen, Huei Hsun; Takeuchi, Tomonori; Devansh, Patel; Galasso, Francesco; Chen, Jin; Chan, Lili; Tolwani, Ashita J; Nadkarni, Girish N; Neyra, Javier A Abstract: Acute…
Peripheral Transcriptomics in Acute and Long-Term Kidney Dysfunction in SARS-CoV2 Infection.
Link: https://doi.org/10.34067/KID.0000000727 Authors: Jayaraman, Pushkala; Rajagopal, Madhumitha; Paranjpe, Ishan; Suarez-Farinas, Mayte; Liharska, Lora; Thompson, Ryan; Del Valle, Diane Marie; Beckmann, Noam; Lund, Anina N; Gownivaripally, Pooja; Oh, Wonsuk; Gulamali, Faris F; Kauffman, Justin; Gonzalez-Kozlova, Edgar;…
KidneyintelX.dkd: An Innovation in Precision Medicine for Diabetic Kidney Disease.
Link: https://doi.org/10.1681/ASN.0000000644 Authors: Coca, Steven G; Nadkarni, Girish N Abstract:
Natural Language Processing Identifies Under-Documentation of Symptoms in Patients on Hemodialysis.
Link: https://doi.org/10.34067/KID.0000000694 Authors: Dai, Yang; Wen, Huei Hsun; Yang, Joanna; Gupta, Neepa; Rhee, Connie; Horowitz, Carol R; Mohottige, Dinushika; Nadkarni, Girish N; Coca, Steven; Chan, Lili Abstract: Patients on hemodialysis (HD) have a high burden…
Effect of Tiered Implementation of Clinical Decision Support System for Acute Kidney Injury and Nephrotoxin Exposure in Cardiac Surgery Patients.
Link: https://doi.org/10.1055/s-0044-1791822 Authors: Justice, Christopher M; Nevin, Connor; Neely, Rebecca L; Dilcher, Brian; Kovacic-Scherrer, Nicole; Carter-Templeton, Heather; Ostrowski, Aaron; Krafcheck, Jacob; Smith, Gordon; McCarthy, Paul; Pincavitch, Jami; Kane-Gill, Sandra; Freeman, Robert; Kellum, John A; Kohli-Seth,…
The Role of Kt/V and Creatinine clearance on Assisting Optimization of Serum Phosphorus Levels among Patients on PD.
Link: https://doi.org/10.34067/KID.0000000618 Authors: Uribarri, Jaime; Guedes, Murilo; Diaz Bessone, Maria Ines; Chan, Lili; De La Torre, Andres; Mermelstein, Ariella; Garcia-Garcia, Guillermo; Raimann, Jochen; Moraes, Thyago; Peters, Vincent; Konings, Stijn; Farrell, Doug; Sharma, Shuchita; Guinsburg, Adrian;…
Cardiology
Time-to-Event Genome-Wide Association Study for Incident Cardiovascular Disease in People With Type 2 Diabetes.
Link: https://doi.org/10.2337/dc23-2274 Authors: Kwak, Soo Heon; Hernandez-Cancela, Ryan B; DiCorpo, Daniel A; Condon, David E; Merino, Jordi; Wu, Peitao; Brody, Jennifer A; Yao, Jie; Guo, Xiuqing; Ahmadizar, Fariba; Meyer, Mariah; Sincan, Murat; Mercader, Josep M;…
Large language model uncertainty proxies: discrimination and calibration for medical diagnosis and treatment.
Link: https://doi.org/10.1093/jamia/ocae254 Authors: Savage, Thomas; Wang, John; Gallo, Robert; Boukil, Abdessalem; Patel, Vishwesh; Safavi-Naini, Seyed Amir Ahmad; Soroush, Ali; Chen, Jonathan H Abstract: The inability of large language models (LLMs) to communicate uncertainty is a…
Deep Learning-Based Electrocardiogram Analysis Predicts Biventricular Dysfunction and Dilation in Congenital Heart Disease.
Link: https://doi.org/S0735-1097(24)07676-9 Authors: Mayourian, Joshua; Gearhart, Addison; La Cava, William G; Vaid, Akhil; Nadkarni, Girish N; Triedman, John K; Powell, Andrew J; Wald, Rachel M; Valente, Anne Marie; Geva, Tal; Duong, Son Q; Ghelani, Sunil…
Artificial intelligence-guided detection of under-recognised cardiomyopathies on point-of-care cardiac ultrasonography: a multicentre study.
Link: https://doi.org/S2589-7500(24)00249-8 Authors: Oikonomou, Evangelos K; Vaid, Akhil; Holste, Gregory; Coppi, Andreas; McNamara, Robert L; Baloescu, Cristiana; Krumholz, Harlan M; Wang, Zhangyang; Apakama, Donald J; Nadkarni, Girish N; Khera, Rohan Abstract: Point-of-care ultrasonography (POCUS) enables…
The impact of common and rare genetic variants on bradyarrhythmia development.
Link: https://doi.org/10.1038/s41588-024-01978-2 Authors: Weng, Lu-Chen; Rämö, Joel T; Jurgens, Sean J; Khurshid, Shaan; Chaffin, Mark; Hall, Amelia Weber; Morrill, Valerie N; Wang, Xin; Nauffal, Victor; Sun, Yan V; Beer, Dominik; Lee, Simon; Nadkarni, Girish N;…
Effect of Tiered Implementation of Clinical Decision Support System for Acute Kidney Injury and Nephrotoxin Exposure in Cardiac Surgery Patients.
Link: https://doi.org/10.1055/s-0044-1791822 Authors: Justice, Christopher M; Nevin, Connor; Neely, Rebecca L; Dilcher, Brian; Kovacic-Scherrer, Nicole; Carter-Templeton, Heather; Ostrowski, Aaron; Krafcheck, Jacob; Smith, Gordon; McCarthy, Paul; Pincavitch, Jami; Kane-Gill, Sandra; Freeman, Robert; Kellum, John A; Kohli-Seth,…
Critical Care
Transforming Cardiovascular Care With Artificial Intelligence: From Discovery to Practice: JACC State-of-the-Art Review.
Link: https://doi.org/S0735-1097(24)07195-X Authors: Khera, Rohan; Oikonomou, Evangelos K; Nadkarni, Girish N; Morley, Jessica R; Wiens, Jenna; Butte, Atul J; Topol, Eric J Abstract: Artificial intelligence (AI) has the potential to transform every facet of cardiovascular…
Local large language models for privacy-preserving accelerated review of historic echocardiogram reports.
Link: https://doi.org/10.1093/jamia/ocae085 Authors: Vaid, Akhil; Duong, Son Q; Lampert, Joshua; Kovatch, Patricia; Freeman, Robert; Argulian, Edgar; Croft, Lori; Lerakis, Stamatios; Goldman, Martin; Khera, Rohan; Nadkarni, Girish N Abstract: The study developed framework that leverages an…
Evaluating the accuracy of a state-of-the-art large language model for prediction of admissions from the emergency room.
Link: https://doi.org/10.1093/jamia/ocae103 Authors: Glicksberg, Benjamin S; Timsina, Prem; Patel, Dhaval; Sawant, Ashwin; Vaid, Akhil; Raut, Ganesh; Charney, Alexander W; Apakama, Donald; Carr, Brendan G; Freeman, Robert; Nadkarni, Girish N; Klang, Eyal Abstract: Artificial intelligence (AI)…
Deep Learning-Based Electrocardiogram Analysis Predicts Biventricular Dysfunction and Dilation in Congenital Heart Disease.
Link: https://doi.org/S0735-1097(24)07676-9 Authors: Mayourian, Joshua; Gearhart, Addison; La Cava, William G; Vaid, Akhil; Nadkarni, Girish N; Triedman, John K; Powell, Andrew J; Wald, Rachel M; Valente, Anne Marie; Geva, Tal; Duong, Son Q; Ghelani, Sunil…
Extracting social support and social isolation information from clinical psychiatry notes: comparing a rule-based natural language processing system and a large language model.
Link: https://doi.org/10.1093/jamia/ocae260 Authors: Patra, Braja Gopal; Lepow, Lauren A; Kasi Reddy Jagadeesh Kumar, Praneet; Vekaria, Veer; Sharma, Mohit Manoj; Adekkanattu, Prakash; Fennessy, Brian; Hynes, Gavin; Landi, Isotta; Sanchez-Ruiz, Jorge A; Ryu, Euijung; Biernacka, Joanna M;…
Clinical factors associated with hospital mortality in critically ill adult COVID-19 patients with AKI requiring CRRT: A multicenter study.
Link: https://doi.org/10.5414/CN111404 Authors: Cama-Olivares, Augusto; Tamhane, Ashutosh; Ortiz-Soriano, Victor; Farrell, Douglas; Wen, Huei Hsun; Takeuchi, Tomonori; Devansh, Patel; Galasso, Francesco; Chen, Jin; Chan, Lili; Tolwani, Ashita J; Nadkarni, Girish N; Neyra, Javier A Abstract: Acute…
Post-operative Care
Applications of ChatGPT in Heart Failure Prevention, Diagnosis, Management, and Research: A Narrative Review.
Link: https://doi.org/10.3390/diagnostics14212393 Authors: Ghanta, Sai Nikhila; Al’Aref, Subhi J; Lala-Trinidade, Anuradha; Nadkarni, Girish N; Ganatra, Sarju; Dani, Sourbha S; Mehta, Jawahar L Abstract: Heart failure (HF) is a leading cause of mortality, morbidity, and financial…
Unveiling the Future of Postoperative Outcomes Prediction: The Role of Machine Learning and Trust in Healthcare.
Link: https://doi.org/10.1007/s10916-024-02106-7 Authors: Hofer, Ira S; Wax, David B Abstract:
Echocardiographic Predictors of Readiness for Double Switch Operation and Postoperative Ejection Fraction in Patients With Congenitally Corrected Transposition of the Great Arteries Undergoing Left Ventricular Retraining.
Link: https://doi.org/S0894-7317(24)00438-3 Authors: Duong, Son Q; Ho, Deborah; Punn, Rajesh; Sganga, Danielle; Mainwaring, Richard; Ma, Michael; Hanley, Frank L; Lee, Kyong-Jin; Maskatia, Shiraz A Abstract: In patients with congenitally corrected transposition of the great arteries…
Economic Impact of Postoperative Urinary Retention in the US Hospital Setting.
Link: https://doi.org/10.36469/001c.121641 Authors: Wang, Weijia; Marks-Anglin, Arielle; Turzhitsky, Vladimir; Mark, Robert J; Otero Rosales, Aurelio; Bailey, Nathaniel W; Jiang, Yiling; Abueg, Joseph; Hofer, Ira S; Weingarten, Toby N Abstract:
Postoperative Acute Kidney Injury is Associated with Persistent Renal Dysfunction: A Multicenter Propensity Matched Cohort Study.
Link: https://doi.org/10.1101/2024.06.06.24308455 Authors: Stannard, Blaine; Epstein, Richard H; Gabel, Eilon; Nadkarni, Girish N; Ouyang, Yuxia; Lin, Hung-Mo; Salari, Valiollah; Hofer, Ira S Abstract: The risk of developing a persistent reduction in renal function after postoperative…
Remote Monitoring and Artificial Intelligence: Outlook for 2050.
Link: https://doi.org/10.1213/ANE.0000000000006712 Authors: Feinstein, Max; Katz, Daniel; Demaria, Samuel; Hofer, Ira S Abstract: Remote monitoring and artificial intelligence will become common and intertwined in anesthesiology by 2050. In the intraoperative period, technology will lead to…
Gastroenterology
Physiological Data Collected From Wearable Devices Identify and Predict Inflammatory Bowel Disease Flares.
Link: https://doi.org/10.1053/j.gastro.2024.12.024 Authors: Hirten, Robert P; Danieletto, Matteo; Sanchez-Mayor, Milagros; Whang, Jessica K; Lee, Kyung Won; Landell, Kyle; Zweig, Micol; Helmus, Drew; Fuchs, Thomas J; Fayad, Zahi A; Nadkarni, Girish N; Keefer, Laurie; Suarez-Farinas, Mayte;…
Deep Learning and Gastric Cancer: Systematic Review of AI-Assisted Endoscopy.
Link: https://doi.org/10.3390/diagnostics13243613 Authors: Klang, Eyal; Sourosh, Ali; Nadkarni, Girish N; Sharif, Kassem; Lahat, Adi Abstract: Gastric cancer (GC), a significant health burden worldwide, is typically diagnosed in the advanced stages due to its non-specific symptoms…
Effects of Mirikizumab on Histologic Resolution of Crohn’s Disease in a Randomized Controlled Phase 2 Trial.
Link: https://doi.org/S1542-3565(23)00948-5 Authors: Magro, Fernando; Protic, Marijana; De Hertogh, Gert; Chan, Lai Shan; Pollack, Paul; Jairath, Vipul; Carlier, Hilde; Hon, Emily; Feagan, Brian G; Harpaz, Noam; Pai, Rish; Reinisch, Walter Abstract: Histologic evaluation of mucosal…
Natural Language Processing Can Automate Extraction of Barrett’s Esophagus Endoscopy Quality Metrics.
Link: https://doi.org/10.1101/2023.07.11.23292529 Authors: Soroush, Ali; Diamond, Courtney J; Zylberberg, Haley M; May, Benjamin; Tatonetti, Nicholas; Abrams, Julian A; Weng, Chunhua Abstract: To develop an automated natural language processing (NLP) method for extracting high-fidelity Barrett’s Esophagus…
Potential kidney toxicity from the antiviral drug tenofovir: new indications, new formulations, and a new prodrug.
Link: https://doi.org/10.1097/MNH.0000000000000392 Authors: Chan, Lili; Asriel, Benjamin; Eaton, Ellen F; Wyatt, Christina M Abstract: The antiviral agent tenofovir is highly effective for the treatment of HIV and hepatitis B virus infections, and the older prodrug…
Visual Analytics to Leverage Anesthesia Electronic Health Record.
Link: https://doi.org/10.1213/ANE.0000000000006175 Authors: Kahn, Ronald A; Gal, Jonathan S; Hofer, Ira S; Wax, David B; Villar, Joshua I; Levin, Mathew A Abstract: Visual analytics is the science of analytical reasoning supported by interactive visual interfaces…
COVID-19
Clinical factors associated with hospital mortality in critically ill adult COVID-19 patients with AKI requiring CRRT: A multicenter study.
Link: https://doi.org/10.5414/CN111404 Authors: Cama-Olivares, Augusto; Tamhane, Ashutosh; Ortiz-Soriano, Victor; Farrell, Douglas; Wen, Huei Hsun; Takeuchi, Tomonori; Devansh, Patel; Galasso, Francesco; Chen, Jin; Chan, Lili; Tolwani, Ashita J; Nadkarni, Girish N; Neyra, Javier A Abstract: Acute…
Peripheral Transcriptomics in Acute and Long-Term Kidney Dysfunction in SARS-CoV2 Infection.
Link: https://doi.org/10.34067/KID.0000000727 Authors: Jayaraman, Pushkala; Rajagopal, Madhumitha; Paranjpe, Ishan; Suarez-Farinas, Mayte; Liharska, Lora; Thompson, Ryan; Del Valle, Diane Marie; Beckmann, Noam; Lund, Anina N; Gownivaripally, Pooja; Oh, Wonsuk; Gulamali, Faris F; Kauffman, Justin; Gonzalez-Kozlova, Edgar;…
Sex Differences in Long COVID.
Link: https://doi.org/10.1001/jamanetworkopen.2024.55430 Authors: Shah, Dimpy P; Thaweethai, Tanayott; Karlson, Elizabeth W; Bonilla, Hector; Horne, Benjamin D; Mullington, Janet M; Wisnivesky, Juan P; Hornig, Mady; Shinnick, Daniel J; Klein, Jonathan D; Erdmann, Nathaniel B; Brosnahan, Shari…
2024 Update of the RECOVER-Adult Long COVID Research Index.
Link: https://doi.org/10.1001/jama.2024.24184 Authors: Geng, Linda N; Erlandson, Kristine M; Hornig, Mady; Letts, Rebecca; Selvaggi, Caitlin; Ashktorab, Hassan; Atieh, Ornina; Bartram, Logan; Brim, Hassan; Brosnahan, Shari B; Brown, Jeanette; Castro, Mario; Charney, Alexander; Chen, Peter; Deeks,…
Measurement of circulating viral antigens post-SARS-CoV-2 infection in a multicohort study.
Link: https://doi.org/S1198-743X(24)00432-4 Authors: Swank, Zoe; Borberg, Ella; Chen, Yulu; Senussi, Yasmeen; Chalise, Sujata; Manickas-Hill, Zachary; Yu, Xu G; Li, Jonathan Z; Alter, Galit; Henrich, Timothy J; Kelly, J Daniel; Hoh, Rebecca; Goldberg, Sarah A; Deeks,…
Differentiation of Prior SARS-CoV-2 Infection and Postacute Sequelae by Standard Clinical Laboratory Measurements in the RECOVER Cohort.
Link: https://doi.org/10.7326/M24-0737 Authors: Erlandson, Kristine M; Geng, Linda N; Selvaggi, Caitlin A; Thaweethai, Tanayott; Chen, Peter; Erdmann, Nathan B; Goldman, Jason D; Henrich, Timothy J; Hornig, Mady; Karlson, Elizabeth W; Katz, Stuart D; Kim, C;…
Bioinformatics
Time-to-Event Genome-Wide Association Study for Incident Cardiovascular Disease in People With Type 2 Diabetes.
Link: https://doi.org/10.2337/dc23-2274 Authors: Kwak, Soo Heon; Hernandez-Cancela, Ryan B; DiCorpo, Daniel A; Condon, David E; Merino, Jordi; Wu, Peitao; Brody, Jennifer A; Yao, Jie; Guo, Xiuqing; Ahmadizar, Fariba; Meyer, Mariah; Sincan, Murat; Mercader, Josep M;…
Local large language models for privacy-preserving accelerated review of historic echocardiogram reports.
Link: https://doi.org/10.1093/jamia/ocae085 Authors: Vaid, Akhil; Duong, Son Q; Lampert, Joshua; Kovatch, Patricia; Freeman, Robert; Argulian, Edgar; Croft, Lori; Lerakis, Stamatios; Goldman, Martin; Khera, Rohan; Nadkarni, Girish N Abstract: The study developed framework that leverages an…
Deep Learning-Based Electrocardiogram Analysis Predicts Biventricular Dysfunction and Dilation in Congenital Heart Disease.
Link: https://doi.org/S0735-1097(24)07676-9 Authors: Mayourian, Joshua; Gearhart, Addison; La Cava, William G; Vaid, Akhil; Nadkarni, Girish N; Triedman, John K; Powell, Andrew J; Wald, Rachel M; Valente, Anne Marie; Geva, Tal; Duong, Son Q; Ghelani, Sunil…
Peripheral Transcriptomics in Acute and Long-Term Kidney Dysfunction in SARS-CoV2 Infection.
Link: https://doi.org/10.34067/KID.0000000727 Authors: Jayaraman, Pushkala; Rajagopal, Madhumitha; Paranjpe, Ishan; Suarez-Farinas, Mayte; Liharska, Lora; Thompson, Ryan; Del Valle, Diane Marie; Beckmann, Noam; Lund, Anina N; Gownivaripally, Pooja; Oh, Wonsuk; Gulamali, Faris F; Kauffman, Justin; Gonzalez-Kozlova, Edgar;…
Sex Differences in Long COVID.
Link: https://doi.org/10.1001/jamanetworkopen.2024.55430 Authors: Shah, Dimpy P; Thaweethai, Tanayott; Karlson, Elizabeth W; Bonilla, Hector; Horne, Benjamin D; Mullington, Janet M; Wisnivesky, Juan P; Hornig, Mady; Shinnick, Daniel J; Klein, Jonathan D; Erdmann, Nathaniel B; Brosnahan, Shari…
Visual-textual integration in LLMs for medical diagnosis: A preliminary quantitative analysis.
Link: https://doi.org/10.1016/j.csbj.2024.12.019 Authors: Agbareia, Reem; Omar, Mahmud; Soffer, Shelly; Glicksberg, Benjamin S; Nadkarni, Girish N; Klang, Eyal Abstract: Visual data from images is essential for many medical diagnoses. This study evaluates the performance of multimodal…
Machine Learning
Evaluating the accuracy of a state-of-the-art large language model for prediction of admissions from the emergency room.
Link: https://doi.org/10.1093/jamia/ocae103 Authors: Glicksberg, Benjamin S; Timsina, Prem; Patel, Dhaval; Sawant, Ashwin; Vaid, Akhil; Raut, Ganesh; Charney, Alexander W; Apakama, Donald; Carr, Brendan G; Freeman, Robert; Nadkarni, Girish N; Klang, Eyal Abstract: Artificial intelligence (AI)…
Transforming Cardiovascular Care With Artificial Intelligence: From Discovery to Practice: JACC State-of-the-Art Review.
Link: https://doi.org/S0735-1097(24)07195-X Authors: Khera, Rohan; Oikonomou, Evangelos K; Nadkarni, Girish N; Morley, Jessica R; Wiens, Jenna; Butte, Atul J; Topol, Eric J Abstract: Artificial intelligence (AI) has the potential to transform every facet of cardiovascular…
Extracting social support and social isolation information from clinical psychiatry notes: comparing a rule-based natural language processing system and a large language model.
Link: https://doi.org/10.1093/jamia/ocae260 Authors: Patra, Braja Gopal; Lepow, Lauren A; Kasi Reddy Jagadeesh Kumar, Praneet; Vekaria, Veer; Sharma, Mohit Manoj; Adekkanattu, Prakash; Fennessy, Brian; Hynes, Gavin; Landi, Isotta; Sanchez-Ruiz, Jorge A; Ryu, Euijung; Biernacka, Joanna M;…
Deep Learning-Based Electrocardiogram Analysis Predicts Biventricular Dysfunction and Dilation in Congenital Heart Disease.
Link: https://doi.org/S0735-1097(24)07676-9 Authors: Mayourian, Joshua; Gearhart, Addison; La Cava, William G; Vaid, Akhil; Nadkarni, Girish N; Triedman, John K; Powell, Andrew J; Wald, Rachel M; Valente, Anne Marie; Geva, Tal; Duong, Son Q; Ghelani, Sunil…
Clinical factors associated with hospital mortality in critically ill adult COVID-19 patients with AKI requiring CRRT: A multicenter study.
Link: https://doi.org/10.5414/CN111404 Authors: Cama-Olivares, Augusto; Tamhane, Ashutosh; Ortiz-Soriano, Victor; Farrell, Douglas; Wen, Huei Hsun; Takeuchi, Tomonori; Devansh, Patel; Galasso, Francesco; Chen, Jin; Chan, Lili; Tolwani, Ashita J; Nadkarni, Girish N; Neyra, Javier A Abstract: Acute…
Artificial intelligence-guided detection of under-recognised cardiomyopathies on point-of-care cardiac ultrasonography: a multicentre study.
Link: https://doi.org/S2589-7500(24)00249-8 Authors: Oikonomou, Evangelos K; Vaid, Akhil; Holste, Gregory; Coppi, Andreas; McNamara, Robert L; Baloescu, Cristiana; Krumholz, Harlan M; Wang, Zhangyang; Apakama, Donald J; Nadkarni, Girish N; Khera, Rohan Abstract: Point-of-care ultrasonography (POCUS) enables…
LLM-NLP
Transforming Cardiovascular Care With Artificial Intelligence: From Discovery to Practice: JACC State-of-the-Art Review.
Link: https://doi.org/S0735-1097(24)07195-X Authors: Khera, Rohan; Oikonomou, Evangelos K; Nadkarni, Girish N; Morley, Jessica R; Wiens, Jenna; Butte, Atul J; Topol, Eric J Abstract: Artificial intelligence (AI) has the potential to transform every facet of cardiovascular…
Local large language models for privacy-preserving accelerated review of historic echocardiogram reports.
Link: https://doi.org/10.1093/jamia/ocae085 Authors: Vaid, Akhil; Duong, Son Q; Lampert, Joshua; Kovatch, Patricia; Freeman, Robert; Argulian, Edgar; Croft, Lori; Lerakis, Stamatios; Goldman, Martin; Khera, Rohan; Nadkarni, Girish N Abstract: The study developed framework that leverages an…
Evaluating the accuracy of a state-of-the-art large language model for prediction of admissions from the emergency room.
Link: https://doi.org/10.1093/jamia/ocae103 Authors: Glicksberg, Benjamin S; Timsina, Prem; Patel, Dhaval; Sawant, Ashwin; Vaid, Akhil; Raut, Ganesh; Charney, Alexander W; Apakama, Donald; Carr, Brendan G; Freeman, Robert; Nadkarni, Girish N; Klang, Eyal Abstract: Artificial intelligence (AI)…
Large language model uncertainty proxies: discrimination and calibration for medical diagnosis and treatment.
Link: https://doi.org/10.1093/jamia/ocae254 Authors: Savage, Thomas; Wang, John; Gallo, Robert; Boukil, Abdessalem; Patel, Vishwesh; Safavi-Naini, Seyed Amir Ahmad; Soroush, Ali; Chen, Jonathan H Abstract: The inability of large language models (LLMs) to communicate uncertainty is a…
Extracting social support and social isolation information from clinical psychiatry notes: comparing a rule-based natural language processing system and a large language model.
Link: https://doi.org/10.1093/jamia/ocae260 Authors: Patra, Braja Gopal; Lepow, Lauren A; Kasi Reddy Jagadeesh Kumar, Praneet; Vekaria, Veer; Sharma, Mohit Manoj; Adekkanattu, Prakash; Fennessy, Brian; Hynes, Gavin; Landi, Isotta; Sanchez-Ruiz, Jorge A; Ryu, Euijung; Biernacka, Joanna M;…
Deep Learning-Based Electrocardiogram Analysis Predicts Biventricular Dysfunction and Dilation in Congenital Heart Disease.
Link: https://doi.org/S0735-1097(24)07676-9 Authors: Mayourian, Joshua; Gearhart, Addison; La Cava, William G; Vaid, Akhil; Nadkarni, Girish N; Triedman, John K; Powell, Andrew J; Wald, Rachel M; Valente, Anne Marie; Geva, Tal; Duong, Son Q; Ghelani, Sunil…
Machine Vision
Local large language models for privacy-preserving accelerated review of historic echocardiogram reports.
Link: https://doi.org/10.1093/jamia/ocae085 Authors: Vaid, Akhil; Duong, Son Q; Lampert, Joshua; Kovatch, Patricia; Freeman, Robert; Argulian, Edgar; Croft, Lori; Lerakis, Stamatios; Goldman, Martin; Khera, Rohan; Nadkarni, Girish N Abstract: The study developed framework that leverages an…
Extracting social support and social isolation information from clinical psychiatry notes: comparing a rule-based natural language processing system and a large language model.
Link: https://doi.org/10.1093/jamia/ocae260 Authors: Patra, Braja Gopal; Lepow, Lauren A; Kasi Reddy Jagadeesh Kumar, Praneet; Vekaria, Veer; Sharma, Mohit Manoj; Adekkanattu, Prakash; Fennessy, Brian; Hynes, Gavin; Landi, Isotta; Sanchez-Ruiz, Jorge A; Ryu, Euijung; Biernacka, Joanna M;…
Deep Learning-Based Electrocardiogram Analysis Predicts Biventricular Dysfunction and Dilation in Congenital Heart Disease.
Link: https://doi.org/S0735-1097(24)07676-9 Authors: Mayourian, Joshua; Gearhart, Addison; La Cava, William G; Vaid, Akhil; Nadkarni, Girish N; Triedman, John K; Powell, Andrew J; Wald, Rachel M; Valente, Anne Marie; Geva, Tal; Duong, Son Q; Ghelani, Sunil…
Artificial intelligence-guided detection of under-recognised cardiomyopathies on point-of-care cardiac ultrasonography: a multicentre study.
Link: https://doi.org/S2589-7500(24)00249-8 Authors: Oikonomou, Evangelos K; Vaid, Akhil; Holste, Gregory; Coppi, Andreas; McNamara, Robert L; Baloescu, Cristiana; Krumholz, Harlan M; Wang, Zhangyang; Apakama, Donald J; Nadkarni, Girish N; Khera, Rohan Abstract: Point-of-care ultrasonography (POCUS) enables…
The role of deep learning in diagnostic imaging of spondyloarthropathies: a systematic review.
Link: https://doi.org/10.1007/s00330-024-11261-x Authors: Omar, Mahmud; Watad, Abdulla; McGonagle, Dennis; Soffer, Shelly; Glicksberg, Benjamin S; Nadkarni, Girish N; Klang, Eyal Abstract: Diagnostic imaging is an integral part of identifying spondyloarthropathies (SpA), yet the interpretation of these…
Deep Learning for Contrast Enhanced Mammography – A Systematic Review.
Link: https://doi.org/10.1016/j.acra.2024.11.035 Authors: Sorin, Vera; Sklair-Levy, Miri; Glicksberg, Benjamin S; Konen, Eli; Nadkarni, Girish N; Klang, Eyal Abstract: Contrast-enhanced mammography (CEM) is a relatively novel imaging technique that enables both anatomical and functional breast imaging,…
Recurrent Learning
Comparison of Approaches for Prediction of Renal Replacement Therapy-Free Survival in Patients with Acute Kidney Injury.
Link: https://doi.org/10.1159/000513700 Authors: Pattharanitima, Pattharawin; Vaid, Akhil; Jaladanki, Suraj K; Paranjpe, Ishan; O’Hagan, Ross; Chauhan, Kinsuk; Van Vleck, Tielman T; Duffy, Aine; Chaudhary, Kumardeep; Glicksberg, Benjamin S; Neyra, Javier A; Coca, Steven G; Chan, Lili;…
Contrastive Learning Improves Critical Event Prediction in COVID-19 Patients.
Link: https://doi.org/arXiv:2101.04013v1 Authors: Wanyan, Tingyi; Honarvar, Hossein; Jaladanki, Suraj K; Zang, Chengxi; Naik, Nidhi; Somani, Sulaiman; Freitas, Jessica K De; Paranjpe, Ishan; Vaid, Akhil; Miotto, Riccardo; Nadkarni, Girish N; Zitnik, Marinka; ArifulAzad, ; Wang, Fei;…
Relational Learning Improves Prediction of Mortality in COVID-19 in the Intensive Care Unit.
Link: https://doi.org/10.1109/tbdata.2020.3048644 Authors: Wanyan, Tingyi; Vaid, Akhil; De Freitas, Jessica K; Somani, Sulaiman; Miotto, Riccardo; Nadkarni, Girish N; Azad, Ariful; Ding, Ying; Glicksberg, Benjamin S Abstract: Traditional Machine Learning (ML) models have had limited success…
Signal Processing
Deep Learning-Based Electrocardiogram Analysis Predicts Biventricular Dysfunction and Dilation in Congenital Heart Disease.
Link: https://doi.org/S0735-1097(24)07676-9 Authors: Mayourian, Joshua; Gearhart, Addison; La Cava, William G; Vaid, Akhil; Nadkarni, Girish N; Triedman, John K; Powell, Andrew J; Wald, Rachel M; Valente, Anne Marie; Geva, Tal; Duong, Son Q; Ghelani, Sunil…
Artificial intelligence-guided detection of under-recognised cardiomyopathies on point-of-care cardiac ultrasonography: a multicentre study.
Link: https://doi.org/S2589-7500(24)00249-8 Authors: Oikonomou, Evangelos K; Vaid, Akhil; Holste, Gregory; Coppi, Andreas; McNamara, Robert L; Baloescu, Cristiana; Krumholz, Harlan M; Wang, Zhangyang; Apakama, Donald J; Nadkarni, Girish N; Khera, Rohan Abstract: Point-of-care ultrasonography (POCUS) enables…
Deep Learning for Contrast Enhanced Mammography – A Systematic Review.
Link: https://doi.org/10.1016/j.acra.2024.11.035 Authors: Sorin, Vera; Sklair-Levy, Miri; Glicksberg, Benjamin S; Konen, Eli; Nadkarni, Girish N; Klang, Eyal Abstract: Contrast-enhanced mammography (CEM) is a relatively novel imaging technique that enables both anatomical and functional breast imaging,…
Artificial intelligence-guided detection of under-recognized cardiomyopathies on point-of-care cardiac ultrasound: a multi-center study.
Link: https://doi.org/10.1101/2024.03.10.24304044 Authors: Oikonomou, Evangelos K; Vaid, Akhil; Holste, Gregory; Coppi, Andreas; McNamara, Robert L; Baloescu, Cristiana; Krumholz, Harlan M; Wang, Zhangyang; Apakama, Donald J; Nadkarni, Girish N; Khera, Rohan Abstract: Point-of-care ultrasonography (POCUS) enables…
Characterizing cell type specific transcriptional differences between the living and postmortem human brain.
Link: https://doi.org/10.1101/2024.05.01.24306590 Authors: Vornholt, Eric; Liharska, Lora E; Cheng, Esther; Hashemi, Alice; Park, You Jeong; Ziafat, Kimia; Wilkins, Lillian; Silk, Hannah; Linares, Lisa M; Thompson, Ryan C; Sullivan, Brendan; Moya, Emily; Nadkarni, Girish N; Sebra,…
Pediatric ECG-Based Deep Learning to Predict Left Ventricular Dysfunction and Remodeling.
Link: https://doi.org/10.1161/CIRCULATIONAHA.123.067750 Authors: Mayourian, Joshua; La Cava, William G; Vaid, Akhil; Nadkarni, Girish N; Ghelani, Sunil J; Mannix, Rebekah; Geva, Tal; Dionne, Audrey; Alexander, Mark E; Duong, Son Q; Triedman, John K Abstract: Artificial intelligence-enhanced…
Time Series
Distinguishing neonatal culture-negative sepsis from rule-out sepsis with artificial intelligence-derived graphs.
Link: https://doi.org/10.1038/s41390-024-03458-z Authors: Holmes, Emma; Kauffman, Justin; Juliano, Courtney; Duchon, Jennifer; Nadkarni, Girish N Abstract: Novel artificial intelligence methods can aide in identification of cases of conditions using only unstructured electronic health record data. This…
A novel method leveraging time series data to improve subphenotyping and application in critically ill patients with COVID-19.
Link: https://doi.org/S0933-3657(23)00264-6 Authors: Oh, Wonsuk; Jayaraman, Pushkala; Tandon, Pranai; Chaddha, Udit S; Kovatch, Patricia; Charney, Alexander W; Glicksberg, Benjamin S; Nadkarni, Girish N Abstract: Computational subphenotyping, a data-driven approach to understanding disease subtypes, is a…
Interatrial Block Association With Adverse Cardiovascular Outcomes in Patients Without a History of Atrial Fibrillation.
Link: https://doi.org/S2405-500X(23)00254-2 Authors: Lampert, Joshua; Power, David; Havaldar, Shreyas; Govindarajulu, Usha; Kawamura, Iwanari; Maan, Abhishek; Miller, Marc A; Menon, Kartikeya; Koruth, Jacob; Whang, William; Bagiella, Emilia; Bayes-Genis, Antoni; Musikantow, Daniel; Turagam, Mohit; Bayes de Luna,…
Using sequence clustering to identify clinically relevant subphenotypes in patients with COVID-19 admitted to the intensive care unit.
Link: https://doi.org/10.1093/jamia/ocab252 Authors: Oh, Wonsuk; Jayaraman, Pushkala; Sawant, Ashwin S; Chan, Lili; Levin, Matthew A; Charney, Alexander W; Kovatch, Patricia; Glicksberg, Benjamin S; Nadkarni, Girish N Abstract: The novel coronavirus disease 2019 (COVID-19) has heterogenous…
Visual Analytics to Leverage Anesthesia Electronic Health Record.
Link: https://doi.org/10.1213/ANE.0000000000006175 Authors: Kahn, Ronald A; Gal, Jonathan S; Hofer, Ira S; Wax, David B; Villar, Joshua I; Levin, Mathew A Abstract: Visual analytics is the science of analytical reasoning supported by interactive visual interfaces…
Acute Kidney Injury in Patients Hospitalized With COVID-19 in New York City: Temporal Trends From March 2020 to April 2021.
Link: https://doi.org/10.1016/j.xkme.2021.06.008 Authors: Dellepiane, Sergio; Vaid, Akhil; Jaladanki, Suraj K; Coca, Steven; Fayad, Zahi A; Charney, Alexander W; Bottinger, Erwin P; He, John Cijiang; Glicksberg, Benjamin S; Chan, Lili; Nadkarni, Girish Abstract:
Deep Learning
Deep Learning-Based Electrocardiogram Analysis Predicts Biventricular Dysfunction and Dilation in Congenital Heart Disease.
Link: https://doi.org/S0735-1097(24)07676-9 Authors: Mayourian, Joshua; Gearhart, Addison; La Cava, William G; Vaid, Akhil; Nadkarni, Girish N; Triedman, John K; Powell, Andrew J; Wald, Rachel M; Valente, Anne Marie; Geva, Tal; Duong, Son Q; Ghelani, Sunil…
Artificial intelligence-guided detection of under-recognised cardiomyopathies on point-of-care cardiac ultrasonography: a multicentre study.
Link: https://doi.org/S2589-7500(24)00249-8 Authors: Oikonomou, Evangelos K; Vaid, Akhil; Holste, Gregory; Coppi, Andreas; McNamara, Robert L; Baloescu, Cristiana; Krumholz, Harlan M; Wang, Zhangyang; Apakama, Donald J; Nadkarni, Girish N; Khera, Rohan Abstract: Point-of-care ultrasonography (POCUS) enables…
The role of deep learning in diagnostic imaging of spondyloarthropathies: a systematic review.
Link: https://doi.org/10.1007/s00330-024-11261-x Authors: Omar, Mahmud; Watad, Abdulla; McGonagle, Dennis; Soffer, Shelly; Glicksberg, Benjamin S; Nadkarni, Girish N; Klang, Eyal Abstract: Diagnostic imaging is an integral part of identifying spondyloarthropathies (SpA), yet the interpretation of these…
Deep Learning for Contrast Enhanced Mammography – A Systematic Review.
Link: https://doi.org/10.1016/j.acra.2024.11.035 Authors: Sorin, Vera; Sklair-Levy, Miri; Glicksberg, Benjamin S; Konen, Eli; Nadkarni, Girish N; Klang, Eyal Abstract: Contrast-enhanced mammography (CEM) is a relatively novel imaging technique that enables both anatomical and functional breast imaging,…
Detection of neurologic changes in critically ill infants using deep learning on video data: a retrospective single center cohort study.
Link: https://doi.org/10.1016/j.eclinm.2024.102919 Authors: Gleason, Alec; Richter, Florian; Beller, Nathalia; Arivazhagan, Naveen; Feng, Rui; Holmes, Emma; Glicksberg, Benjamin S; Morton, Sarah U; La Vega-Talbott, Maite; Fields, Madeline; Guttmann, Katherine; Nadkarni, Girish N; Richter, Felix Abstract: Infant…
Leveraging Artificial Intelligence and Data Science for Integration of Social Determinants of Health in Emergency Medicine: Scoping Review.
Link: https://doi.org/10.2196/57124 Authors: Abbott, Ethan E; Apakama, Donald; Richardson, Lynne D; Chan, Lili; Nadkarni, Girish N Abstract: Social determinants of health (SDOH) are critical drivers of health disparities and patient outcomes. However, accessing and collecting…